Microsatellite
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 A number of DNA samples from specimens of Littorina plena amplified using polymerase chain reaction with primers targeting a variable simple sequence repeat (SSR, a.k.a. microsatellite) locus. Samples have been run on a 5% polyacrylamide gel and visualized using silver staining. |
Microsatellites, also known as Simple Sequence Repeats (SSRs) or short tandem repeats (STRs), are repeating sequences of 2-6 base pairs of DNA.
- See also: Wikipedia
- Related: minisatellite, Satellite DNA, genetic marker, mobile element, transposon, junk DNA, variable number tandem repeat, short tandem repeat, Trinucleotide repeat disorders, microsatellite instability, Snpstr
| Microsatellite DNA Methodology Microsatellite DNA Methodology www.bio.davidson.edu/.../microsatellite.html - Web |
| MicrosatDB MicrosatDB discovery.vbi.vt.edu/MicrosatDB/ - Web |
| Eremorph – web based resource for prediction and s... Eremorph – web based resource for prediction and study of gene variations discovery.vbi.vt.edu/eremorph/ - Web |
Gallery for «Microsatellite»
Average relevance
| SSR Finder SSR Finder www.csufresno.edu/ssrfinder - Web |
| JSTRING - Java Search for Tandem Repeats in genome... JSTRING - Java Search for Tandem Repeats in genomes bioinf.dms.med.uniroma1.it/JSTRING/ - Web |
| Microsatellite repeats finder Microsatellite repeats finder www.biophp.org/minitools/microsatellite_repeats_finder/demo.php - Web |
| MISA - MIcroSAtellite identification tool MISA - MIcroSAtellite identification tool pgrc.ipk-gatersleben.de/misa/misa.html - Web |
| MREPATT MREPATT alggen.lsi.upc.edu/recerca/search/mrepatt/ - Web |
| Mreps Mreps bioinfo.lifl.fr/mreps - Web |
| IMEx IMEx www.cdfd.org.in/imex - Web |
| FireMuSat2+ FireMuSat2+ www.dna-algo.co.za/downloads.htm - Web |
Low relevance
| Phobos - a tandem repeat search tool for perfect a... Phobos - a tandem repeat search tool for perfect and imperfect repeats - the maximum pattern size depends only on computational power www.rub.de/spezzoo/cm/cm_phobos.htm - Web |
| Poly Poly www.bioinformatics.org/poly/ - Web |
| Tandem Repeats Finder Tandem Repeats Finder tandem.bu.edu/trf/trf.html - Web |
| STAR STAR atgc.lirmm.fr/star - Web |
| TandemSWAN TandemSWAN strand.imb.ac.ru/swan/index.html - Web |
| TRED TRED www.sci.brooklyn.cuny.edu/~sokol/tandem - Web |
| TROLL TROLL finder.sourceforge.net - Web |
| SciRoKo SciRoKo www.kofler.or.at/bioinformatics/SciRoKo/index.html - Web |
| Zebrafish Repeats Zebrafish Repeats kbrin.a-bldg.louisville.edu/.../ - Web |
